Virtuelle (Nano) Welten PDB Molecule of the Month 97: Circadian Clock Proteins

Structure ID	Title	Authors	Publication Year	Journal Name	Volume ID	First Page	Pubmed
1M2E	Structure and Function from the Circadian Clock Protein KaiA of Synechococcus elongatus: A potential Clock Input Mechanism	Williams, S.B., Vakonakis, I., Golden, S.S., LiWang, A.C.	2002	Proc.Natl.Acad.Sci.USA	99	15357	12438647
1M2F	Structure and Function from the Circadian Clock Protein KaiA of Synechococcus elongatus: A potential Clock Input Mechanism	Williams, S.B., Vakonakis, I., Golden, S.S., LiWang, A.C.	2002	Proc.Natl.Acad.Sci.USA	99	15357	12438647
1Q6A	NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: Implications for KaiA-KaiC interaction	Vakonakis, I., Sun, J., Wu, T., Holzenburg, A., Golden, S.S., LiWang, A.C.	2004	Proc.Natl.Acad.Sci.USA	101	1479	14749515
1Q6B	NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: implications for KaiA-KaiC interaction	Vakonakis, I., Sun, J., Wu, T., Holzenburg, A., Golden, S.S., LiWang, A.C.	2004	Proc.Natl.Acad.Sci.USA	101	1479	14749515
1R5P	Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC	Garces, R.G., Wu, N., Gillon, W., Pai, E.F.	2004	Embo J.	23	1688	15071498
1R5Q	Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC	Garces, R.G., Wu, N., Gillon, W., Pai, E.F.	2004	Embo J.	23	1688	15071498
1R8J	Crystal structure of circadian clock protein KaiA from Synechococcus elongatus	Ye, S., Vakonakis, I., Ioerger, T.R., LiWang, A.C., Sacchettini, J.C.	2004	J.Biol.Chem.	279	20511	15007067
1SUY	Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation.	Vakonakis, I., LiWang, A.C.	2004	Proc.Natl.Acad.Sci.Usa	101	10925	15256595
1SV1	Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation.	Vakonakis, I., LiWang, A.C.	2004	Proc.Natl.Acad.Sci.Usa	101	10925	15256595
1T4Y	Structure of the N-terminal domain of the circadian clock-associated histidine kinase SasA.	Vakonakis, I., Klewer, D.A., Williams, S.B., Golden, S.S., LiWang, A.C.	2004	J.Mol.Biol.	342	9	15313603
1T4Z	Structure of the N-terminal domain of the circadian clock-associated histidine kinase SasA.	Vakonakis, I., Klewer, D.A., Williams, S.B., Golden, S.S., LiWang, A.C.	2004	J.Mol.Biol.	342	9	15313603
1TF7	Visualizing a Circadian Clock Protein; Crystal Structure of KaiC and Functional Insights	Pattanayek, R., Wang, J., Mori, T., Xu, Y., Johnson, C.H., Egli, M.	2004	Mol.Cell	15	375	15304218
1U9I	Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses	Xu, Y., Mori, T., Pattanayek, R., Pattanayek, S., Egli, M., Johnson, C.H.	2004	PROC.NATL.ACAD.SCI.USA	101	13933	15347809
1V2Z	Crystal structure of the C-terminal clock-oscillator domain of the cyanobacterial KaiA protein	Uzumaki, T., Fujita, M., Nakatsu, T., Hayashi, F., Shibata, H., Itoh, N., Kato, H., Ishiura, M.	2004	NAT.STRUCT.MOL.BIOL.	11	623	15170179
1VGL	Tetrameric structure of cyanobacterial circadian clock protein KaiB and associated functions	Iwase, R., Imada, K., Hayashi, F., Uzumaki, T., Namba, K., Ishiura, M.	n/a	To be Published	n/a	n/a	n/a
1WA9	Crystal structure and interactions of the PAS repeat region of the Drosophila clock protein PERIOD.	Yildiz, O., Doi, M., Yujnovsky, I., Cardone, L., Berndt, A., Hennig, S., Schulze, S., Urbanke, C., Sassone-Corsi, P., Wolf, E.	2005	Mol.Cell	17	69	15629718
1WWJ	Tetrameric architecture of the circadian clock protein KaiB. A novel interface for intermolecular interactions and its impact on the circadian rhythm.	Hitomi, K., Oyama, T., Han, S., Arvai, A.S., Getzoff, E.D.	2005	J.Biol.Chem.	280	19127	15716274
2DQL	Crystal structure of the circadian clock associated protein Pex from anabena	Kurosawa, T., Iwase, R., Kouyama, T., Sakata, S., Murakami, M., Hasegawa, D., Uzumaki, T., Hayashi, F., Ishiura, M.	n/a	To be Published	n/a	n/a	n/a
2E1N	Structural and Biochemical Characterization of a Cyanobacterium Circadian Clock-modifier Protein	Arita, K., Hashimoto, H., Igari, K., Akaboshi, M., Kutsuna, S., Sato, M., Shimizu, T.	2007	J.Biol.Chem.	282	1128	17098741
2GBL	Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.	Pattanayek, R., Williams, D.R., Pattanayek, S., Xu, Y., Mori, T., Johnson, C.H., Stewart, P.L., Egli, M.	2006	Embo J.	25	2017	16628225
2J48	NMR structure of the pseudo-receiver domain of CikA.	Gao, T., Zhang, X., Ivleva, N.B., Golden, S.S., LiWang, A.	2007	Protein Sci.	16	465	17322531
2PD7	Conformational switching in the fungal light sensor Vivid	Zoltowski, B.D., Schwerdtfeger, C., Widom, J., Loros, J.J., Bilwes, A.M., Dunlap, J.C., Crane, B.R.	2007	Science	316	1054	17510367
2PD8	Conformational switching in the fungal light sensor Vivid	Zoltowski, B.D., Schwerdtfeger, C., Widom, J., Loros, J.J., Bilwes, A.M., Dunlap, J.C., Crane, B.R.	2007	Science	316	1054	17510367
2PDR	Conformational switching in the fungal light sensor Vivid	Zoltowski, B.D., Schwerdtfeger, C., Widom, J., Loros, J.J., Bilwes, A.M., Dunlap, J.C., Crane, B.R.	2007	Science	316	1054	17510367
2PDT	Conformational switching in the fungal light sensor Vivid	Zoltowski, B.D., Schwerdtfeger, C., Widom, J., Loros, J.J., Bilwes, A.M., Dunlap, J.C., Crane, B.R.	2007	Science	316	1054	17510367

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Circadian Clock Proteins

A list of 'circadian clock' related entries in the PDB